Basic Information
Locus ID:
Cgl05G0686
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 6148578 | 6152047 | + | Cgl05G0686 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 35,037.47 Da | 52.07 | 55.00 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 171 | 214 | 1.9E-6 | IPR001841 |
| Pfam | PF14599 | Zinc-ribbon | 220 | 277 | 7.6E-25 | IPR039512 |
| Pfam | PF05495 | CHY zinc finger | 36 | 117 | 8.9E-19 | IPR008913 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 108 | 165 | 3.01E-18 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 32 | 107 | 5.75E-17 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 170 | 218 | 1.38E-10 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 243 | 285 | 1.1E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 153 | 240 | 5.7E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 172 | 214 | 5.9E-7 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 107 | 171 | 33.327564 | IPR017921 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 172 | 215 | 11.795887 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 29 | 105 | 25.682692 | IPR008913 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22920.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_040993077.1 | E3 ubiquitin-protein ligase RZFP34 isoform X1 [Juglans microcarpa x Juglans regia] | 0 |
| Q9FFB6 | E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana OX=3702 GN=RZPF34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4EHU1 | E3 ubiquitin-protein ligase RZFP34 OS=Juglans regia OX=51240 GN=LOC108989711 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology