Basic Information
Locus ID:
Cgl05G0402
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 3501261 | 3516629 | - | Cgl05G0402 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 170,508.38 Da | 45.02 | 86.66 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 790 | 831 | 2.6957E-22 | - |
| CDD | cd01989 | STK_N | 13 | 177 | 1.1566E-37 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 1446 | 1487 | 1.39157E-20 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 511 | 755 | 1.9E-35 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1158 | 1364 | 9.4E-30 | IPR001245 |
| Pfam | PF04564 | U-box domain | 1443 | 1512 | 4.3E-14 | IPR003613 |
| Pfam | PF04564 | U-box domain | 787 | 852 | 6.6E-14 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1436 | 1512 | 8.83E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1132 | 1410 | 3.51E-53 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 780 | 851 | 2.38E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 484 | 761 | 9.58E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 475 | 578 | 8.8E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 579 | 773 | 4.3E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1131 | 1225 | 2.5E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1226 | 1428 | 2.0E-35 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1441 | 1512 | 2.6E-25 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 785 | 859 | 5.7E-24 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 789 | 852 | 2.0E-25 | IPR003613 |
| SMART | SM00504 | Ubox_2 | 1445 | 1508 | 2.2E-25 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1153 | 1446 | 27.863073 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 506 | 766 | 31.721655 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 1441 | 1512 | 34.358463 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 785 | 859 | 29.705627 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1106 | 1126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 487 | - | - |
| Coils | Coil | Coil | 1028 | 1076 | - | - |
| Coils | Coil | Coil | 381 | 485 | - | - |
| Coils | Coil | Coil | 336 | 356 | - | - |
| Coils | Coil | Coil | 1084 | 1125 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_048504102.1 | uncharacterized protein LOC104887375 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9RIX1 | RING-type E3 ubiquitin transferase OS=Spinacia oleracea OX=3562 GN=SOVF_061300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology