Basic Information
Locus ID:
Cgl05G0401
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 3477481 | 3485007 | - | Cgl05G0401 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 99,615.26 Da | 52.17 | 84.49 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 46 | 199 | 3.01703E-50 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 824 | 865 | 6.17109E-24 | - |
| CDD | cd14066 | STKc_IRAK | 538 | 800 | 9.52219E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 535 | 788 | 7.2E-43 | IPR000719 |
| Pfam | PF04564 | U-box domain | 821 | 890 | 1.6E-17 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 809 | 890 | 3.44E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 507 | 794 | 3.51E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 49 | 162 | 5.69E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 510 | 604 | 3.3E-27 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 39 | 164 | 1.5E-7 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 605 | 805 | 2.3E-49 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 818 | 890 | 2.6E-28 | IPR013083 |
| SMART | SM00220 | serkin_6 | 532 | 800 | 2.9E-39 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 823 | 886 | 2.6E-30 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 532 | 801 | 34.506054 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 819 | 890 | 39.462433 | IPR003613 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 538 | 559 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 650 | 662 | - | IPR008271 |
| Coils | Coil | Coil | 414 | 504 | - | - |
| Coils | Coil | Coil | 358 | 382 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_023923174.1 | U-box domain-containing protein 33-like [Quercus suber] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2I4FU21 | U-box domain-containing protein 33-like OS=Juglans regia OX=51240 GN=LOC109002039 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology