Basic Information
Locus ID:
Cgl05G0335
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 2884061 | 2887373 | + | Cgl05G0335 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 45,277.00 Da | 39.45 | 75.71 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 120 | 411 | 2.1E-89 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 300 | 401 | 4.71E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 297 | 413 | 6.9E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 300 | 402 | 25.655828 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 115 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_041018030.1 | auxin-responsive protein IAA27-like [Juglans microcarpa x Juglans regia] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A833XIH5 | Auxin-responsive protein (Fragment) OS=Juglans regia OX=51240 GN=F2P56_016492 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology