Basic Information
Locus ID:
Cgl05G0231
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 1904856 | 1905975 | + | Cgl05G0231 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 37,040.72 Da | 43.38 | 73.12 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 5 | 36 | 2.1E-4 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 113 | 153 | 3.0E-9 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 162 | 203 | 9.7E-7 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 77 | 318 | 2.09E-35 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 55 | 328 | 3.3E-34 | IPR015915 |
| SMART | SM00612 | kelc_smart | 118 | 166 | 8.0E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 170 | 217 | 4.4E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_041018000.1 | F-box/kelch-repeat protein At1g80440-like [Juglans microcarpa x Juglans regia] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QDN4 | F-box domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_002051 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology