Basic Information
Locus ID:
Cgl05G0066
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Transcription factor bHLH131-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 555368 | 557665 | - | Cgl05G0066 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.63 | 56,493.68 Da | 42.99 | 83.16 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 70 | 125 | 4.95733E-6 | IPR001623 |
| CDD | cd04873 | ACT_UUR-ACR-like | 423 | 474 | 3.7963E-6 | - |
| Pfam | PF00226 | DnaJ domain | 70 | 133 | 3.9E-7 | IPR001623 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 337 | 382 | 4.1E-8 | IPR011598 |
| SUPERFAMILY | SSF55021 | ACT-like | 420 | 485 | 1.1E-5 | - |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 68 | 134 | 1.57E-8 | IPR036869 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 336 | 392 | 1.7E-12 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 328 | 391 | 2.9E-13 | IPR036638 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 66 | 142 | 1.2E-7 | IPR036869 |
| Gene3D | G3DSA:3.30.70.260 | - | 420 | 490 | 5.0E-5 | - |
| SMART | SM00353 | finulus | 339 | 388 | 1.3E-10 | IPR011598 |
| SMART | SM00271 | dnaj_3 | 69 | 128 | 0.0029 | IPR001623 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 333 | 382 | 14.525703 | IPR011598 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 70 | 136 | 8.703305 | IPR001623 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38070.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_023873779.1 | transcription factor bHLH131-like [Quercus suber] | 0 |
| P0CB25 | Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QMP7 | J domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_004343 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology