Basic Information
Locus ID:
Cgl04G2738
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 34056854 | 34059526 | + | Cgl04G2738 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 44,190.76 Da | 39.94 | 100.15 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05659 | Arabidopsis broad-spectrum mildew resistance protein RPW8 | 10 | 141 | 2.1E-21 | IPR008808 |
| Pfam | PF00931 | NB-ARC domain | 197 | 324 | 1.4E-6 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 182 | 368 | 4.19E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 178 | 332 | 2.6E-20 | IPR027417 |
| ProSiteProfiles | PS51153 | RPW8 domain profile. | 1 | 153 | 11.236883 | IPR008808 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_041006793.1 | probable disease resistance protein At5g66900 [Juglans microcarpa x Juglans regia] | 0 |
| TrEMBL | A0A5N6QN94 | RPW8 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq04G2514, Ceq04G2515, Ceq04G2516 |
| Casuarinaceae | Casuarina glauca | 4 | Cgl03G2899, Cgl04G2738, Cgl04G2739, Cgl05G0316 |