Basic Information
Locus ID:
Cgl04G2624
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 32790540 | 32801227 | - | Cgl04G2624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 100,828.52 Da | 48.23 | 61.97 | -1.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 644 | 688 | 0.00339348 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 40 | 251 | 5.28E-9 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 641 | 683 | 4.21E-6 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 632 | 690 | 1.4E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 898 | 916 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 704 | 738 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 880 | 897 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 695 | 930 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 646 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 846 | 879 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 813 | 845 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 634 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 518 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_042987466.1 | nucleolar and coiled-body phosphoprotein 1 isoform X1 [Carya illinoinensis] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6R8T7 | Tudor domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_013070 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology