Basic Information
Locus ID:
Cgl04G2546
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 31892366 | 31896255 | + | Cgl04G2546 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.31 | 69,719.02 Da | 46.15 | 104.25 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 272 | 294 | 0.63 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 540 | 561 | 0.018 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 353 | 375 | 0.35 | IPR001611 |
| Pfam | PF00646 | F-box domain | 67 | 111 | 5.3E-7 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 484 | 502 | 0.49 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 245 | 268 | 0.066 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 307 | 648 | 1.08E-33 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 180 | 423 | 1.02E-36 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 66 | 104 | 8.9E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 59 | 107 | 3.5E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 246 | 449 | 4.2E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 168 | 245 | 9.1E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 450 | 649 | 9.0E-34 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 458 | 483 | 14.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 246 | 271 | 1.1E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 272 | 297 | 3.7E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 590 | 615 | 0.37 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 564 | 588 | 150.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 484 | 509 | 0.0018 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 511 | 536 | 7.1 | IPR006553 |
| SMART | SM00256 | fbox_2 | 70 | 110 | 2.8E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 404 | 429 | 79.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 220 | 245 | 4.2E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 194 | 219 | 0.007 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 538 | 563 | 9.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 352 | 377 | 0.0078 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 378 | 403 | 0.014 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 133 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_050268432.1 | EIN3-binding F-box protein 1 [Quercus robur] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J4Q6A7 | F-box domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_029236 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology