halophFGD

Basic Information

Locus ID: Cgl04G2540

Species & Taxonomic ID: Casuarina glauca & 3522

Genome Assembly: GCA_028551395.1

Description: SPX domain-containing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr04	31838915	31842992	-	Cgl04G2540

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.98	37,427.71 Da	50.08	90.37	-0.41

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14481	SPX_AtSPX1_like	2	195	6.59292E-71	-
Pfam	PF03105	SPX domain	162	208	5.2E-7	IPR004331
Pfam	PF03105	SPX domain	1	60	1.2E-6	IPR004331
ProSiteProfiles	PS51382	SPX domain profile.	1	206	23.603064	IPR004331
MobiDBLite	mobidb-lite	consensus disorder prediction	240	263	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	234	263	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	40	61	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	40	60	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT2G26660.1	SPX domain gene 2.
RefSeq	XP_042989578.1	SPX domain-containing protein 1-like [Carya illinoinensis]
Swiss-Prot	O48781	SPX domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SPX2 PE=2 SV=1
TrEMBL	A0A8T1Q457	SPX domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_07G222300 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	7	jg1807, jg19778, jg26804, jg26810, jg31624, jg40243, jg4615
Aizoaceae	Mesembryanthemum crystallinum	3	gene_10628, gene_17870, gene_24638
Amaranthaceae	Atriplex hortensis	4	Ah014346, Ah023211, Ah032813, Ah034692
Amaranthaceae	Beta vulgaris	4	BVRB_2g030200, BVRB_2g040290, BVRB_2g040330, BVRB_8g194430
Amaranthaceae	Salicornia bigelovii	9	Sbi_jg21595, Sbi_jg21596, Sbi_jg22225, Sbi_jg29246 ... Sbi_jg29726, Sbi_jg3485, Sbi_jg40704, Sbi_jg43246, Sbi_jg50711
Amaranthaceae	Salicornia europaea	4	Seu_jg16149, Seu_jg18652, Seu_jg2265, Seu_jg6478
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00000237, GOSA_00004399, GOSA_00007962, GOSA_00008753
Amaranthaceae	Suaeda glauca	9	Sgl11336, Sgl16725, Sgl42039, Sgl46815, Sgl62697, Sgl66461 ... Sgl67258, Sgl67318, Sgl70785
Amaranthaceae	Chenopodium album	11	gene:ENSEOMG00000012025, gene:ENSEOMG00000013004 ... gene:ENSEOMG00000014340, gene:ENSEOMG00000017603, gene:ENSEOMG00000018317, gene:ENSEOMG00000018792, gene:ENSEOMG00000033603, gene:ENSEOMG00000033674, gene:ENSEOMG00000048000, gene:ENSEOMG00000048014, gene:ENSEOMG00000049114
Amaranthaceae	Chenopodium quinoa	8	CQ.Regalona.r1.1AG0006580, CQ.Regalona.r1.1BG0021300 ... CQ.Regalona.r1.2AG0006570, CQ.Regalona.r1.2AG0022880, CQ.Regalona.r1.2BG0006790, CQ.Regalona.r1.2BG0022880, CQ.Regalona.r1.8AG0021950, CQ.Regalona.r1.8BG0020520
Anacardiaceae	Pistacia vera	4	pistato.v30002460, pistato.v30128120, pistato.v30249980 ... pistato.v30255160
Apiaceae	Apium graveolens	4	Ag1G00087, Ag2G02837, Ag3G02760, Ag4G00916
Arecaceae	Cocos nucifera	5	COCNU_03G016860, COCNU_13G001870, contig69552339G000010 ... scaffold005863G000020, scaffold012478G000010
Arecaceae	Phoenix dactylifera	4	gene-LOC103708749, gene-LOC103713471, gene-LOC103716313 ... gene-LOC103717836
Asparagaceae	Asparagus officinalis	7	AsparagusV1_01.2475.V1.1, AsparagusV1_02.2293.V1.1 ... AsparagusV1_03.1321.V1.1, AsparagusV1_04.3061.V1.1, AsparagusV1_06.1018.V1.1, AsparagusV1_06.1747.V1.1, AsparagusV1_08.2452.V1.1
Asteraceae	Flaveria trinervia	7	Ftri11G30672, Ftri13G30499, Ftri14G01702, Ftri18G06814 ... Ftri7G02724, Ftri7G15454, Ftri8G23876
Brassicaceae	Arabidopsis thaliana	4	AT2G26660.1, AT2G45130.1, AT5G15330.1, AT5G20150.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10014185m.g.v1.0, Thhalv10014356m.g.v1.0 ... Thhalv10016985m.g.v1.0, Thhalv10023655m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp4g09230.v2.2, Sp4g27190.v2.2, Sp6g24260.v2.2 ... Sp6g28730.v2.2
Brassicaceae	Brassica nigra	6	BniB01g001650.2N, BniB02g047500.2N, BniB05g043300.2N ... BniB08g010290.2N, BniB08g029390.2N, BniB08g032540.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq04G2335, Ceq05G1139, Ceq06G0628, Ceq08G0308
Casuarinaceae	Casuarina glauca	4	Cgl04G2540, Cgl05G1149, Cgl06G0647, Cgl08G0257
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno01g10110, gene.Cymno02g04110, gene.Cymno09g08860 ... gene.Cymno11g01780
Dunaliellaceae	Dunaliella salina	2	Dusal.0039s00001.v1.0, Dusal.1114s00001.v1.0
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate01g27280, gene.Thate03g00580, gene.Thate03g20620 ... gene.Thate03g26490
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-90
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG02.221, evm.TU.LG02.222, evm.TU.LG07.1442 ... evm.TU.LG07.958, evm.TU.LG07.959
Plantaginaceae	Plantago ovata	5	Pov_00005495, Pov_00013316, Pov_00014950, Pov_00028003 ... Pov_00032606
Plumbaginaceae	Limonium bicolor	6	Lb1G03875, Lb2G10812, Lb2G12673, Lb2G12679, Lb2G13081 ... Lb2G13084
Poaceae	Echinochloa crus-galli	19	AH01.2302, AH01.3348, AH01.450, AH02.1965, AH06.2227 ... AH07.756, BH01.2590, BH01.2618, BH01.291, BH01.3716, BH02.2018, BH06.2007, BH07.885, CH01.131, CH01.2615, CH01.3928, CH02.2182, CH06.2251, CH07.643
Poaceae	Eleusine coracana subsp. coracana	12	gene-QOZ80_1AG0020220, gene-QOZ80_1BG0070120 ... gene-QOZ80_2AG0105430, gene-QOZ80_2AG0123510, gene-QOZ80_2BG0158890, gene-QOZ80_2BG0178380, gene-QOZ80_3AG0209850, gene-QOZ80_3AG0251740, gene-QOZ80_3BG0255040, gene-QOZ80_3BG0276340, gene-QOZ80_6AG0544400, gene-QOZ80_6BG0497920
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.2HG0125510.1, HORVU.MOREX.r3.5HG0528310.1 ... HORVU.MOREX.r3.4HG0396980.1.CDS1, HORVU.MOREX.r3.7HG0719650.1, HORVU.MOREX.r3.7HG0750980.1
Poaceae	Lolium multiflorum	8	gene-QYE76_011168, gene-QYE76_016747, gene-QYE76_021397 ... gene-QYE76_034961, gene-QYE76_039718, gene-QYE76_039733, gene-QYE76_060550, gene-QYE76_067384
Poaceae	Oryza coarctata	11	Oco03G004580, Oco04G005310, Oco05G015610, Oco05G027860 ... Oco06G016130, Oco06G028840, Oco11G012350, Oco12G012530, Oco14G013310, Oco19G003440, Oco20G003480
Poaceae	Oryza sativa	5	LOC_Os02g10780.1, LOC_Os03g29250.1, LOC_Os03g61200.1 ... LOC_Os06g40120.1, LOC_Os10g25310.1
Poaceae	Paspalum vaginatum	7	gene-BS78_01G024900, gene-BS78_01G327300, gene-BS78_K056600 ... gene-BS78_03G167500, gene-BS78_04G078200, gene-BS78_10G184700, gene-BS78_K246600
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0105894, Pt_Chr0202080, Pt_Chr0202090, Pt_Chr0306264 ... Pt_Chr0306277, Pt_Chr0400644, Pt_Chr0400666
Poaceae	Sporobolus alterniflorus	17	Chr01G024430, Chr02G018170, Chr02G029830, Chr03G008110 ... Chr04G013100, Chr04G019150, Chr04G031820, Chr05G007500, Chr06G014670, Chr07G012560, Chr07G030850, Chr08G008900, Chr0G008070, Chr0G021840, Chr10G017600, Chr12G032770, Chr20G005320
Poaceae	Thinopyrum elongatum	6	Tel2E01G332800, Tel5E01G779900, Tel7E01G637900 ... Tel7E01G973300, Tel7E01G973600, Tel7E01G977000
Poaceae	Triticum dicoccoides	7	gene_TRIDC2AG021510, gene_TRIDC2BG025490 ... gene_TRIDC4AG054760, gene_TRIDC4AG065630, gene_TRIDC5BG075370, gene_TRIDC7AG052540, gene_TRIDC7BG044970
Poaceae	Triticum aestivum	16	TraesCS2A02G169600.1, TraesCS2B02G195900.1 ... TraesCS2D02G177100.1, TraesCS4A02G367200.1, TraesCS5B02G505400.1, TraesCS5D02G506200.1, TraesCS7A02G376200.1, TraesCS7A02G554000.1, TraesCS7A02G554100.1, TraesCS7A02G554800.1, TraesCS7B02G277700.1, TraesCS7B02G478000.1, TraesCS7D02G372600.1, TraesCS7D02G541100.1, TraesCS7D02G541600.1, TraesCSU02G094800.1
Poaceae	Zea mays	4	Zm00001eb048730_P001, Zm00001eb063280_P003 ... Zm00001eb162710_P001, Zm00001eb386270_P001
Poaceae	Zoysia japonica	9	nbis-gene-12115, nbis-gene-15553, nbis-gene-15554 ... nbis-gene-21396, nbis-gene-33446, nbis-gene-41066, nbis-gene-44051, nbis-gene-46689, nbis-gene-53100
Poaceae	Zoysia macrostachya	8	Zma_g1030, Zma_g10496, Zma_g129, Zma_g15153, Zma_g15987 ... Zma_g2452, Zma_g33034, Zma_g8019
Portulacaceae	Portulaca oleracea	4	evm.TU.LG02.1979, evm.TU.LG19.749, evm.TU.LG23.237 ... evm.TU.LG24.740
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g08440, gene.Posoc03g19780, gene.Posoc03g21020 ... gene.Posoc04g02980, gene.Posoc09g12650
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_10_RagTag.41, evm.TU.Scaffold_3_RagTag.1753 ... evm.TU.Scaffold_4_RagTag.2314, evm.TU.Scaffold_7_RagTag.202
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-12858, nbisL1-mrna-19519, nbisL1-mrna-28085
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-10505, nbisL1-mrna-10552, nbisL1-mrna-18369 ... nbisL1-mrna-21322
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-16480, nbisL1-mrna-2946, nbisL1-mrna-5057 ... nbisL1-mrna-7086
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000008l.1361, evm.TU.utg000019l.164 ... evm.TU.utg000028l.117, evm.TU.utg000033l.24
Rhizophoraceae	Kandelia obovata	4	Maker00001001, Maker00002243, Maker00010465, Maker00014921
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-12143, nbisL1-mrna-16748, nbisL1-mrna-1820 ... nbisL1-mrna-8077
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-14445, nbisL1-mrna-18263, nbisL1-mrna-22345 ... nbisL1-mrna-9757
Salicaceae	Populus euphratica	6	populus_peu00666, populus_peu04767, populus_peu05773 ... populus_peu11140, populus_peu12890, populus_peu31818
Solanaceae	Lycium barbarum	6	gene-LOC132600039, gene-LOC132606075, gene-LOC132621605 ... gene-LOC132635903, gene-LOC132636216, gene-LOC132636957
Solanaceae	Solanum chilense	3	SOLCI002968300, SOLCI003751600, SOLCI003851900
Solanaceae	Solanum pennellii	5	gene-LOC107005465, gene-LOC107008693, gene-LOC107009225 ... gene-LOC107027032, gene-LOC107030280
Tamaricaceae	Reaumuria soongarica	4	STRG.12113_chr02_-, STRG.602_chr01_-, gene_1521, gene_17260
Tamaricaceae	Tamarix chinensis	4	TC01G1269, TC01G1525, TC03G2625, TC10G1332
Zosteraceae	Zostera marina	3	Zosma01g07730.v3.1, Zosma01g17060.v3.1, Zosma05g32320.v3.1