Basic Information
Locus ID:
Cgl04G2452
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 31028966 | 31035085 | - | Cgl04G2452 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 65,253.61 Da | 48.95 | 72.90 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 344 | 570 | 4.9E-75 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 100 | 303 | 5.4E-75 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 362 | 536 | 1.4E-236 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 108 | 573 | 1.4E-236 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 111 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_018839463.2 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Juglans regia] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6RXF9 | ribonuclease P OS=Carpinus fangiana OX=176857 GN=FH972_020776 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology