Basic Information
Locus ID:
Cgl04G2449
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
synthase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 31016540 | 31017393 | + | Cgl04G2449 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.63 | 18,656.63 Da | 30.68 | 78.48 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01397 | Terpene synthase, N-terminal domain | 28 | 72 | 2.4E-11 | IPR001906 |
| SUPERFAMILY | SSF48239 | Terpenoid cyclases/Protein prenyltransferases | 27 | 103 | 1.33E-15 | IPR008930 |
| SUPERFAMILY | SSF48576 | Terpenoid synthases | 132 | 158 | 6.47E-5 | IPR008949 |
| Gene3D | G3DSA:1.50.10.130 | - | 8 | 116 | 2.7E-14 | IPR036965 |
| Gene3D | G3DSA:1.10.600.10 | Farnesyl Diphosphate Synthase | 117 | 158 | 2.8E-6 | IPR008949 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14490.1 | Terpenoid cyclases/Protein prenyltransferases superfamily protein. | 0 |
| RefSeq | XP_030932054.1 | (-)-germacrene D synthase-like [Quercus lobata] | 0 |
| Q6Q3H3 | (-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7N2M944 | (+)-delta-cadinene synthase OS=Quercus lobata OX=97700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2449 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-12345 |
| Rhizophoraceae | Rhizophora mangle | 6 | nbisL1-mrna-22134, nbisL1-mrna-22135, nbisL1-mrna-22804 ... |