Basic Information
Locus ID:
Cgl04G1437
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 18913696 | 18916451 | - | Cgl04G1437 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 62,104.48 Da | 53.57 | 85.15 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 305 | 389 | 2.1176E-38 | - |
| CDD | cd04873 | ACT_UUR-ACR-like | 428 | 482 | 0.00752565 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 25 | 208 | 1.9E-55 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 311 | 356 | 5.4E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 308 | 373 | 1.31E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 305 | 373 | 1.1E-15 | IPR036638 |
| SMART | SM00353 | finulus | 313 | 362 | 1.5E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 307 | 356 | 16.818378 | IPR011598 |
| Coils | Coil | Coil | 346 | 380 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_040988179.1 | transcription factor MYC2 [Juglans microcarpa x Juglans regia] | 0 |
| Q39204 | Transcription factor MYC2 OS=Arabidopsis thaliana OX=3702 GN=MYC2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6QKX5 | BHLH domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003753 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology