Basic Information
Locus ID:
Cgl04G1402
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 18094033 | 18113319 | + | Cgl04G1402 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 96,593.36 Da | 43.81 | 86.81 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 255 | 843 | 1.3E-78 | IPR001394 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 442 | 563 | 4.7E-7 | IPR029346 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 253 | 846 | 9.61E-101 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 245 | 488 | 1.5E-64 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 597 | 848 | 3.4E-48 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 255 | 846 | 50.775097 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 256 | 271 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 789 | 806 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_041026002.1 | ubiquitin carboxyl-terminal hydrolase 8-like [Juglans microcarpa x Juglans regia] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6RU87 | Ubiquitin carboxyl-terminal hydrolase OS=Carpinus fangiana OX=176857 GN=FH972_020062 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology