Basic Information
Locus ID:
Cgl04G1160
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Topless-related protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 14490273 | 14490904 | - | Cgl04G1160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 23,120.09 Da | 47.23 | 85.27 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 33 | 183 | 4.24E-8 | IPR011044 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 198 | 5.4E-8 | IPR015943 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15880.3 | WUS-interacting protein 2. | 0 |
| RefSeq | XP_027333456.1 | topless-related protein 4-like isoform X2 [Abrus precatorius] | 0 |
| Q27GK7 | Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A1UGU8 | Topless-related protein 4 OS=Morella rubra OX=262757 GN=CJ030_MR0G024269 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1160 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G043000 |
| Poaceae | Zea mays | 6 | Zm00001eb006070_P001, Zm00001eb090220_P001 ... |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-7255 |