Basic Information
Locus ID:
Cgl04G1145
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Cell division cycle 20.2, cofactor of APC complex-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 14161111 | 14164153 | + | Cgl04G1145 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 50,738.46 Da | 48.64 | 76.99 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 396 | 429 | 2.7E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 259 | 293 | 6.5E-7 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 176 | 234 | 7.9E-7 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 306 | 344 | 0.19 | IPR001680 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 138 | 431 | 9.42E-58 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 85 | 432 | 1.1E-121 | IPR015943 |
| SMART | SM00320 | WD40_4 | 302 | 344 | 0.041 | IPR001680 |
| SMART | SM00320 | WD40_4 | 170 | 209 | 0.0016 | IPR001680 |
| SMART | SM00320 | WD40_4 | 212 | 249 | 6.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 347 | 387 | 270.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 254 | 293 | 1.2E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 390 | 429 | 1.7E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 261 | 293 | 14.151034 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 177 | 218 | 11.611251 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 261 | 293 | 11.708317 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 177 | 209 | 8.808332 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 397 | 430 | 11.154684 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 397 | 430 | 13.449252 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 416 | 430 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33270.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1) | 0 |
| RefSeq | XP_041013017.1 | cell division cycle 20.2, cofactor of APC complex-like [Juglans microcarpa x Juglans regia] | 0 |
| Q9SZA4 | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QWZ0 | ANAPC4_WD40 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_007874 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology