Basic Information
Locus ID:
Cgl04G0974
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 11925814 | 11942236 | - | Cgl04G0974 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 107,647.12 Da | 54.69 | 86.43 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 775 | 932 | 6.95994E-49 | - |
| Pfam | PF06337 | DUSP domain | 38 | 144 | 6.4E-23 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 327 | 931 | 1.3E-82 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 325 | 934 | 1.61E-104 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 16 | 144 | 1.29E-26 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 312 | 556 | 1.8E-66 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 158 | 243 | 1.3E-12 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 659 | 942 | 2.0E-53 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 5 | 157 | 1.3E-35 | - |
| SMART | SM00695 | dusp | 34 | 147 | 5.3E-33 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 15 | 144 | 18.065304 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 327 | 934 | 55.0238 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 328 | 343 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 876 | 893 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_018835754.1 | ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Juglans regia] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6RW56 | Ubiquitin carboxyl-terminal hydrolase OS=Carpinus fangiana OX=176857 GN=FH972_019968 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology