Basic Information
Locus ID:
Cgl04G0965
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 11815116 | 11819634 | - | Cgl04G0965 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 28,123.69 Da | 37.54 | 98.29 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 230 | 252 | 3.34E-6 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 28 | 71 | 5.23E-7 | IPR035927 |
| Gene3D | G3DSA:3.30.2230.10 | - | 20 | 85 | 2.5E-11 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 208 | 254 | 1.1E-6 | - |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 235 | 250 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_042972521.1 | ubiquitin carboxyl-terminal hydrolase 5 isoform X3 [Carya illinoinensis] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6RW56 | Ubiquitin carboxyl-terminal hydrolase OS=Carpinus fangiana OX=176857 GN=FH972_019968 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology