Basic Information
Locus ID:
Cgl04G0734
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
C1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 9606238 | 9607971 | + | Cgl04G0734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 33,674.60 Da | 56.92 | 65.97 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03107 | C1 domain | 86 | 132 | 8.4E-6 | IPR004146 |
| Pfam | PF03107 | C1 domain | 22 | 65 | 3.3E-7 | IPR004146 |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 22 | 66 | 1.88E-6 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 78 | 143 | 1.15E-5 | - |
| ProSitePatterns | PS00028 | Zinc finger C2H2 type domain signature. | 118 | 140 | - | IPR013087 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq07G2182, Ceq07G2183, Ceq07G2184 |
| Casuarinaceae | Casuarina glauca | 8 | Cgl01G1990, Cgl04G0671, Cgl04G0734, Cgl07G2393, Cgl07G2398 ... |