Basic Information
Locus ID:
Cgl04G0132
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 1867546 | 1873365 | + | Cgl04G0132 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.63 | 79,726.78 Da | 53.75 | 86.13 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 20 | 143 | 9.60472E-30 | - |
| Pfam | PF00069 | Protein kinase domain | 449 | 707 | 1.4E-38 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 42 | 138 | 8.37E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 427 | 711 | 9.71E-66 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 12 | 143 | 3.9E-8 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 520 | 713 | 5.4E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 432 | 519 | 1.4E-24 | - |
| SMART | SM00220 | serkin_6 | 447 | 711 | 2.0E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 447 | 713 | 34.633259 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 565 | 577 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 453 | 474 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 291 | - | - |
| Coils | Coil | Coil | 309 | 332 | - | - |
| Coils | Coil | Coil | 351 | 420 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_041002265.1 | U-box domain-containing protein 33-like [Juglans microcarpa x Juglans regia] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A1VQU2 | U-box domain-containing protein 33 OS=Morella rubra OX=262757 GN=CJ030_MR5G000865 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 5 | Ceq04G0093, Ceq05G0389, Ceq05G0391, Ceq05G0392, Ceq05G0402 |
| Casuarinaceae | Casuarina glauca | 6 | Cgl04G0111, Cgl04G0118, Cgl04G0132, Cgl04G0141, Cgl05G0404 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2803 |