Basic Information
Locus ID:
Cgl04G0111
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 1502694 | 1512701 | - | Cgl04G0111 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 89,006.82 Da | 51.81 | 86.09 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 20 | 154 | 5.74748E-31 | - |
| Pfam | PF00069 | Protein kinase domain | 449 | 694 | 4.1E-28 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 426 | 697 | 5.62E-54 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 703 | 794 | 1.71E-11 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 43 | 138 | 7.53E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 520 | 700 | 6.8E-33 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 11 | 143 | 1.3E-6 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 417 | 519 | 1.3E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 701 | 795 | 1.5E-10 | - |
| SMART | SM00220 | serkin_6 | 447 | 697 | 4.7E-16 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 447 | 705 | 23.439131 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 453 | 474 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 289 | - | - |
| Coils | Coil | Coil | 351 | 420 | - | - |
| Coils | Coil | Coil | 309 | 339 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_041002265.1 | U-box domain-containing protein 33-like [Juglans microcarpa x Juglans regia] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A1VQU2 | U-box domain-containing protein 33 OS=Morella rubra OX=262757 GN=CJ030_MR5G000865 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 5 | Ceq04G0093, Ceq05G0389, Ceq05G0391, Ceq05G0392, Ceq05G0402 |
| Casuarinaceae | Casuarina glauca | 6 | Cgl04G0111, Cgl04G0118, Cgl04G0132, Cgl04G0141, Cgl05G0404 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2803 |