Basic Information
Locus ID:
Cgl04G0100
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
protein UNUSUAL FLORAL
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 1306915 | 1308189 | + | Cgl04G0100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 47,274.82 Da | 49.95 | 82.33 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 36 | 76 | 3.2E-6 | IPR001810 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 62 | 391 | 1.57E-15 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 30 | 108 | 1.44E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 32 | 78 | 1.4E-8 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 101 | 399 | 2.8E-5 | IPR015915 |
| SMART | SM00256 | fbox_2 | 40 | 80 | 5.0E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 34 | 79 | 11.19311 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30950.1 | F-box family protein. Required for the proper identity of the floral meristem. Involved in establishing the whorled pattern of floral organs, in the control of specification of the floral meristem, and in the activation of APETALA3 and PISTILLATA. UFO is found at the AP3 promoter in a LFY-dependent manner, suggesting that it works with LFY to regulate AP3 expression. UFO may also promote the ubiquitylation of LFY. | 0 |
| RefSeq | XP_042943098.1 | protein UNUSUAL FLORAL ORGANS [Carya illinoinensis] | 0 |
| Q39090 | Protein UNUSUAL FLORAL ORGANS OS=Arabidopsis thaliana OX=3702 GN=UFO PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6QAZ7 | F-box domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_001126 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20934 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_5037 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah007976 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_4g086600 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg19250 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5504 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00006812 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl23242, Sgl28312 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000011463, gene:ENSEOMG00000027763 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.4AG0019130 |
| Apiaceae | Apium graveolens | 1 | Ag9G02528 |
| Arecaceae | Cocos nucifera | 1 | scaffold045712G000010 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103721086, gene-LOC120104236 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G19696 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G30950.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10009319m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g26810.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB07g019740.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G0082 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G0100 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g03310 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g23630 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.331 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00012900 |
| Poaceae | Echinochloa crus-galli | 3 | AH06.2587, BH06.2388, CH06.2605 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0547510, gene-QOZ80_6BG0501140 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0738310.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_036336 |
| Poaceae | Oryza coarctata | 2 | Oco11G014780, Oco12G014900 |
| Poaceae | Oryza sativa | 2 | LOC_Os06g35740.1, LOC_Os06g45460.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G219400 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G031510, Chr05G009350, Chr10G019810 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G816900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG067090, gene_TRIDC7BG060970 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G481600.1, TraesCS7B02G384000.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb274390_P001, Zm00001eb389810_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-40506, nbis-gene-55955, nbis-gene-9812 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g33222 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.219, evm.TU.LG04.533 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g08390 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.1524 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26216 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-15057 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4352 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000008l.324 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-17580 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9640 |
| Salicaceae | Populus euphratica | 2 | populus_peu02974, populus_peu33854 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132625109 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107010731, gene-LOC107019684 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_11695 |
| Zosteraceae | Zostera marina | 1 | Zosma03g22530.v3.1 |