Basic Information
Locus ID:
Cgl03G2899
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Short Name:
CCT3
Description:
T-complex protein 1 subunit
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 34272169 | 34275998 | + | Cgl03G2899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 62,349.36 Da | 40.01 | 99.56 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 161 | 289 | 7.17258E-4 | - |
| Pfam | PF05659 | Arabidopsis broad-spectrum mildew resistance protein RPW8 | 9 | 122 | 3.4E-13 | IPR008808 |
| Pfam | PF00931 | NB-ARC domain | 160 | 290 | 1.2E-6 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 401 | 550 | 5.1E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 551 | 2.87E-47 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 142 | 312 | 1.46E-15 | IPR027417 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 370 | 476 | 3.5E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 477 | 552 | 1.6E-18 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 141 | 295 | 4.8E-19 | IPR027417 |
| SMART | SM00220 | serkin_6 | 401 | 552 | 2.4E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 401 | 552 | 27.523857 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 522 | 534 | - | IPR008271 |
| Coils | Coil | Coil | 39 | 80 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_042960583.1 | putative wall-associated receptor kinase-like 16 [Carya illinoinensis] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T1NAT6 | Wall-associated receptor kinase 2 OS=Carya illinoinensis OX=32201 GN=CIPAW_15G028200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq04G2514, Ceq04G2515, Ceq04G2516 |
| Casuarinaceae | Casuarina glauca | 4 | Cgl03G2899, Cgl04G2738, Cgl04G2739, Cgl05G0316 |