Basic Information
Locus ID:
Cgl03G2664
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 31950387 | 31952061 | - | Cgl03G2664 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.58 | 39,371.18 Da | 30.83 | 78.59 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 25 | 359 | 3.94099E-149 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 31 | 353 | 4.5E-83 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 259 | 324 | 6.62E-11 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 31 | 357 | 3.33E-71 | IPR017853 |
| Gene3D | G3DSA:3.10.50.10 | - | 258 | 324 | 2.9E-115 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 42 | 354 | 2.9E-115 | - |
| SMART | SM00636 | 2g34 | 27 | 353 | 9.5E-105 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 27 | 368 | 72.609779 | IPR001223 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_040996617.1 | class V chitinase-like [Juglans microcarpa x Juglans regia] | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9FKR5 | GH18 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19259 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology