Basic Information
Locus ID:
Cgl03G2659
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the glycosyl hydrolase 18 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 31886016 | 31886486 | - | Cgl03G2659 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 15,044.21 Da | 19.64 | 79.48 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 2 | 116 | 7.6E-24 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 2 | 114 | 8.08E-25 | IPR017853 |
| Gene3D | G3DSA:3.10.50.10 | - | 106 | 130 | 3.7E-7 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 93 | 105 | 3.7E-7 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 2 | 92 | 5.9E-22 | - |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 1 | 135 | 23.453375 | IPR001223 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19820.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_018857323.1 | class V chitinase CHIT5b-like [Juglans regia] | 0 |
| A0A072UR65 | Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9FKT3 | GH18 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19278 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology