Basic Information
Locus ID:
Cgl03G2658
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the glycosyl hydrolase 18 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 31881178 | 31882709 | - | Cgl03G2658 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 39,627.33 Da | 36.36 | 84.96 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 33 | 345 | 1.20102E-126 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 37 | 347 | 1.8E-67 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 35 | 277 | 2.88E-62 | IPR017853 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 269 | 334 | 1.98E-11 | IPR029070 |
| Gene3D | G3DSA:3.10.50.10 | - | 268 | 334 | 3.6E-91 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 53 | 345 | 3.6E-91 | - |
| SMART | SM00636 | 2g34 | 34 | 363 | 2.8E-74 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 34 | 363 | 58.728973 | IPR001223 |
| ProSitePatterns | PS01095 | Glycosyl hydrolases family 18 (GH18) active site signature. | 139 | 147 | - | IPR001579 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_040996268.1 | class V chitinase CHIT5b-like [Juglans microcarpa x Juglans regia] | 0 |
| A0A072UR65 | Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6RUK5 | GH18 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_020863 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology