Basic Information
Locus ID:
Cgl03G2654
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the glycosyl hydrolase 18 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 31862916 | 31863604 | - | Cgl03G2654 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 17,639.80 Da | 14.98 | 88.12 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 1 | 136 | 6.8E-21 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 1 | 136 | 1.52E-13 | IPR017853 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 53 | 118 | 3.05E-11 | IPR029070 |
| Gene3D | G3DSA:3.10.50.10 | - | 52 | 118 | 7.3E-37 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 1 | 136 | 7.3E-37 | - |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 1 | 165 | 16.406448 | IPR001223 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_023892580.1 | acidic mammalian chitinase-like [Quercus suber] | 0 |
| A0A072UR65 | Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1 | 0 | |
| TrEMBL | A0A7N2R053 | GH18 domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology