Basic Information
Locus ID:
Cgl03G2652
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the glycosyl hydrolase 18 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 31851882 | 31853520 | - | Cgl03G2652 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 41,961.10 Da | 28.38 | 82.18 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 33 | 368 | 1.41396E-138 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 37 | 363 | 1.1E-73 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 35 | 363 | 1.05E-68 | IPR017853 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 269 | 334 | 8.4E-11 | IPR029070 |
| Gene3D | G3DSA:3.10.50.10 | - | 272 | 334 | 1.3E-15 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 32 | 378 | 1.1E-81 | - |
| SMART | SM00636 | 2g34 | 34 | 363 | 2.9E-94 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 34 | 379 | 67.152512 | IPR001223 |
| ProSitePatterns | PS01095 | Glycosyl hydrolases family 18 (GH18) active site signature. | 139 | 147 | - | IPR001579 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_023918556.1 | acidic mammalian chitinase-like [Quercus suber] | 0 |
| A0A072UR65 | Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6RUK5 | GH18 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_020863 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology