HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Cgl03G2311
Species & Taxonomic ID: Casuarina glauca & 3522
Genome Assembly: GCA_028551395.1
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
chr03 28329626 28349370 + Cgl03G2311
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.59 266,062.84 Da 35.85 107.67 0.05
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13855 Leucine rich repeat 1002 1061 1.7E-7 IPR001611
Pfam PF00069 Protein kinase domain 1160 1376 4.6E-39 IPR000719
Pfam PF00069 Protein kinase domain 208 417 1.3E-41 IPR000719
Pfam PF13855 Leucine rich repeat 1498 1556 4.9E-8 IPR001611
Pfam PF13855 Leucine rich repeat 633 692 1.7E-7 IPR001611
Pfam PF13855 Leucine rich repeat 1817 1876 2.5E-6 IPR001611
Pfam PF13855 Leucine rich repeat 49 109 2.2E-8 IPR001611
Pfam PF13855 Leucine rich repeat 1938 1997 8.3E-8 IPR001611
Pfam PF00069 Protein kinase domain 2096 2311 1.3E-39 IPR000719
Pfam PF13855 Leucine rich repeat 1569 1628 9.5E-7 IPR001611
Pfam PF08263 Leucine rich repeat N-terminal domain 494 532 4.2E-12 IPR013210
Pfam PF13855 Leucine rich repeat 562 620 3.4E-8 IPR001611
Pfam PF00560 Leucine Rich Repeat 905 927 0.22 IPR001611
SUPERFAMILY SSF52058 L domain-like 1768 2022 5.1E-61 -
SUPERFAMILY SSF52058 L domain-like 2 134 8.5E-25 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 191 434 1.01E-66 IPR011009
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 1142 1454 6.47E-69 IPR011009
SUPERFAMILY SSF52058 L domain-like 512 829 6.8E-56 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 2079 2390 2.29E-68 IPR011009
SUPERFAMILY SSF52058 L domain-like 832 1086 1.93E-61 -
SUPERFAMILY SSF52058 L domain-like 1468 1760 1.65E-52 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1240 1468 7.9E-53 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1 143 8.9E-36 IPR032675
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 2176 2407 4.3E-53 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 288 495 3.9E-48 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1469 1709 3.6E-63 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 496 647 7.6E-50 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 799 1093 8.7E-87 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 648 798 1.0E-30 IPR032675
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 1140 1239 2.2E-24 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 2060 2175 7.7E-25 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 187 287 1.0E-23 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1731 2029 1.1E-89 IPR032675
SMART SM00365 LRR_sd22_2 976 1005 420.0 -
SMART SM00365 LRR_sd22_2 1543 1566 110.0 -
SMART SM00365 LRR_sd22_2 607 630 8.6 -
SMART SM00365 LRR_sd22_2 1839 1865 320.0 -
SMART SM00365 LRR_sd22_2 1960 1981 80.0 -
SMART SM00365 LRR_sd22_2 1984 2012 380.0 -
SMART SM00365 LRR_sd22_2 806 832 210.0 -
SMART SM00365 LRR_sd22_2 1567 1593 160.0 -
SMART SM00365 LRR_sd22_2 96 124 650.0 -
SMART SM00365 LRR_sd22_2 1615 1641 14.0 -
SMART SM00365 LRR_sd22_2 1742 1768 170.0 -
SMART SM00365 LRR_sd22_2 1024 1045 80.0 -
SMART SM00365 LRR_sd22_2 631 657 110.0 -
SMART SM00365 LRR_sd22_2 879 905 270.0 -
SMART SM00365 LRR_sd22_2 72 93 110.0 -
SMART SM00365 LRR_sd22_2 679 705 23.0 -
SMART SM00369 LRR_typ_2 1791 1815 10.0 IPR003591
SMART SM00369 LRR_typ_2 607 630 29.0 IPR003591
SMART SM00369 LRR_typ_2 1688 1712 45.0 IPR003591
SMART SM00369 LRR_typ_2 1863 1887 310.0 IPR003591
SMART SM00369 LRR_typ_2 96 121 5.4 IPR003591
SMART SM00369 LRR_typ_2 1519 1543 72.0 IPR003591
SMART SM00369 LRR_typ_2 1912 1936 360.0 IPR003591
SMART SM00369 LRR_typ_2 679 703 6.5 IPR003591
SMART SM00220 serkin_6 1159 1462 1.0E-33 IPR000719
SMART SM00220 serkin_6 207 460 1.1E-32 IPR000719
SMART SM00220 serkin_6 2095 2354 1.3E-34 IPR000719
SMART SM00369 LRR_typ_2 631 655 5.2 IPR003591
SMART SM00369 LRR_typ_2 1839 1862 64.0 IPR003591
SMART SM00369 LRR_typ_2 1567 1591 6.3 IPR003591
SMART SM00369 LRR_typ_2 903 926 51.0 IPR003591
SMART SM00369 LRR_typ_2 1984 2009 10.0 IPR003591
SMART SM00369 LRR_typ_2 72 95 85.0 IPR003591
SMART SM00369 LRR_typ_2 855 879 7.2 IPR003591
SMART SM00369 LRR_typ_2 1960 1983 130.0 IPR003591
SMART SM00369 LRR_typ_2 1024 1047 110.0 IPR003591
SMART SM00369 LRR_typ_2 1615 1638 19.0 IPR003591
SMART SM00369 LRR_typ_2 752 776 180.0 IPR003591
SMART SM00369 LRR_typ_2 1048 1073 16.0 IPR003591
ProSiteProfiles PS50011 Protein kinase domain profile. 207 468 33.742817 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 2095 2434 34.421249 IPR000719
ProSiteProfiles PS51450 Leucine-rich repeat profile. 1026 1049 7.165205 IPR001611
ProSiteProfiles PS50011 Protein kinase domain profile. 1159 1462 35.014877 IPR000719
ProSiteProfiles PS51450 Leucine-rich repeat profile. 74 97 7.21141 IPR001611
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 2101 2123 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 2224 2236 - IPR008271
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 1288 1300 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 213 235 - IPR017441
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 1165 1187 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 330 342 - IPR008271
PRINTS PR00019 Leucine-rich repeat signature 679 692 1.7E-5 -
PRINTS PR00019 Leucine-rich repeat signature 75 88 1.7E-5 -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G47090.1 Leucine-rich repeat protein kinase family protein. 0
RefSeq XP_030950094.1 probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Quercus lobata] 0
Swiss-Prot C0LGP4 Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 0
TrEMBL A0A4Y1QTP9 Leucine-rich repeat protein kinase family protein (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_003667 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Casuarinaceae Casuarina equisetifolia 1 Ceq03G2171
Casuarinaceae Casuarina glauca 3 Cgl03G2310, Cgl03G2311, Cgl03G2313
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.