HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Cgl03G2294
Species & Taxonomic ID: Casuarina glauca & 3522
Genome Assembly: GCA_028551395.1
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
chr03 28124950 28133594 + Cgl03G2294
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.41 96,149.76 Da 41.89 104.18 0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00069 Protein kinase domain 683 766 5.9E-10 IPR000719
Pfam PF08263 Leucine rich repeat N-terminal domain 32 71 1.5E-9 IPR013210
Pfam PF13855 Leucine rich repeat 124 183 3.8E-8 IPR001611
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 653 769 9.54E-21 IPR011009
SUPERFAMILY SSF52058 L domain-like 31 330 1.36E-62 -
SUPERFAMILY SSF52058 L domain-like 345 592 1.81E-53 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 650 754 8.4E-21 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 268 329 1.8E-11 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 30 193 3.5E-53 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 194 267 4.2E-19 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 333 602 6.2E-78 IPR032675
SMART SM00369 LRR_typ_2 482 505 180.0 IPR003591
SMART SM00369 LRR_typ_2 170 194 79.0 IPR003591
SMART SM00369 LRR_typ_2 362 386 23.0 IPR003591
SMART SM00369 LRR_typ_2 506 529 160.0 IPR003591
SMART SM00369 LRR_typ_2 218 242 280.0 IPR003591
SMART SM00219 tyrkin_6 680 807 0.0019 IPR020635
SMART SM00369 LRR_typ_2 98 122 7.2 IPR003591
ProSiteProfiles PS50011 Protein kinase domain profile. 680 874 10.011832 IPR000719
ProSiteProfiles PS51450 Leucine-rich repeat profile. 172 194 7.072797 IPR001611
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 686 709 - IPR017441
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0004713 (protein tyrosine kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K20718 (LRR receptor-like serine/threonine-protein kinase ERECTA [EC:2.7.11.1])
Pathway:
ko04016 (MAPK signaling pathway - plant) map04016 (MAPK signaling pathway - plant)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G26330.1 Leucine-rich receptor-like protein kinase family protein. Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. 0
RefSeq XP_050268121.1 LRR receptor-like serine/threonine-protein kinase ERECTA isoform X1 [Quercus robur] 0
Swiss-Prot Q42371 LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana OX=3702 GN=ERECTA PE=1 SV=1 0
TrEMBL A0A8J4RWE4 Protein kinase domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_005869 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 5 jg14068, jg23990, jg4602, jg7950, jg7951
Aizoaceae Mesembryanthemum crystallinum 1 gene_8054
Amaranthaceae Atriplex hortensis 1 Ah034440
Amaranthaceae Beta vulgaris 1 BVRB_2g033750
Amaranthaceae Salicornia bigelovii 2 Sbi_jg20415, Sbi_jg23364
Amaranthaceae Salicornia europaea 1 Seu_jg17147
Amaranthaceae Suaeda aralocaspica 1 GOSA_00009075
Amaranthaceae Suaeda glauca 2 Sgl63595, Sgl68082
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000016861, gene:ENSEOMG00000022156 ...
gene:ENSEOMG00000051047
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.2AG0013550, CQ.Regalona.r1.2BG0015610
Anacardiaceae Pistacia vera 2 pistato.v30181640, pistato.v30260850
Apiaceae Apium graveolens 4 Ag2G01558, Ag2G01938, Ag7G00418, Ag9G02574
Arecaceae Cocos nucifera 2 COCNU_03G004100, COCNU_08G006160
Arecaceae Phoenix dactylifera 2 gene-LOC103704912, gene-LOC103721746
Asparagaceae Asparagus officinalis 3 AsparagusV1_03.1302.V1.1, AsparagusV1_03.1303.V1.1 ...
AsparagusV1_Unassigned.264.V1.1
Asteraceae Flaveria trinervia 3 Ftri15G21699, Ftri1G09595, Ftri3G24629
Brassicaceae Arabidopsis thaliana 3 AT2G26330.1, AT5G07180.1, AT5G62230.1
Brassicaceae Eutrema salsugineum 3 Thhalv10001898m.g.v1.0, Thhalv10003615m.g.v1.0 ...
Thhalv10012600m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp2g25430.v2.2, Sp4g06960.v2.2, Sp6g35720.v2.2
Brassicaceae Brassica nigra 3 BniB02g024810.2N, BniB02g053710.2N, BniB06g010510.2N
Casuarinaceae Casuarina equisetifolia 2 Ceq02G2029, Ceq03G2152
Casuarinaceae Casuarina glauca 2 Cgl02G2101, Cgl03G2294
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno09g01110, gene.Cymno18g04630
Hydrocharitaceae Thalassia testudinum 2 gene.Thate02g05590, gene.Thate05g25620
Nitrariaceae Nitraria sibirica 2 evm.TU.LG01.2262, evm.TU.LG07.694
Plantaginaceae Plantago ovata 2 Pov_00013390, Pov_00040854
Plumbaginaceae Limonium bicolor 4 Lb1G04460, Lb1G07869, Lb2G12716, Lb4G25723
Poaceae Echinochloa crus-galli 9 AH06.497, AH06.682, AH07.3673, BH06.187, BH06.756, BH07.3483 ...
CH06.177, CH06.785, CH07.3556
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_2AG0147880, gene-QOZ80_2BG0203290 ...
gene-QOZ80_6AG0507270, gene-QOZ80_6AG0512770, gene-QOZ80_6BG0459290, gene-QOZ80_6BG0464660
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.6HG0620170.1, HORVU.MOREX.r3.7HG0644570.1 ...
HORVU.MOREX.r3.7HG0662630.1
Poaceae Lolium multiflorum 3 gene-QYE76_025829, gene-QYE76_027423, gene-QYE76_027630
Poaceae Oryza coarctata 6 Oco03G023250, Oco04G023830, Oco11G001430, Oco11G004670 ...
Oco12G001340, Oco12G004710
Poaceae Oryza sativa 3 LOC_Os02g53720.1, LOC_Os06g03970.1, LOC_Os06g10230.1
Poaceae Paspalum vaginatum 3 gene-BS78_04G295600, gene-BS78_10G022700 ...
gene-BS78_10G079400
Poaceae Puccinellia tenuiflora 4 Pt_Chr0203053, Pt_Chr0304993, Pt_Chr0405065, Pt_Ctg00141
Poaceae Sporobolus alterniflorus 5 Chr06G000840, Chr11G020700, Chr11G023880, Chr15G002120 ...
Chr21G002680
Poaceae Thinopyrum elongatum 3 Tel6E01G593400, Tel7E01G139500, Tel7E01G326500
Poaceae Triticum dicoccoides 6 gene_TRIDC4AG062720, gene_TRIDC6AG050310 ...
gene_TRIDC6BG058860, gene_TRIDC7AG007100, gene_TRIDC7AG020400, gene_TRIDC7BG010400
Poaceae Triticum aestivum 9 TraesCS4A02G422700.1, TraesCS6A02G336300.1 ...
TraesCS6B02G366900.1, TraesCS6D02G316000.1, TraesCS7A02G066200.1, TraesCS7A02G164000.1, TraesCS7B02G069800.2, TraesCS7D02G060400.1, TraesCS7D02G166100.1
Poaceae Zea mays 3 Zm00001eb256740_P004, Zm00001eb278640_P001 ...
Zm00001eb378340_P001
Poaceae Zoysia japonica 6 nbis-gene-34988, nbis-gene-40011, nbis-gene-40299 ...
nbis-gene-4900, nbis-gene-51154, nbis-gene-57279
Poaceae Zoysia macrostachya 5 Zma_g17273, Zma_g29034, Zma_g29298, Zma_g31281, Zma_g31537
Portulacaceae Portulaca oleracea 2 evm.TU.LG07.846, evm.TU.LG15.88
Posidoniaceae Posidonia oceanica 2 gene.Posoc07g02910, gene.Posoc08g04520
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_10_RagTag.654, evm.TU.Scaffold_4_RagTag.1093 ...
evm.TU.Scaffold_11_RagTag.1296
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-12606, nbisL1-mrna-25861
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-15597, nbisL1-mrna-18568, nbisL1-mrna-7054
Rhizophoraceae Ceriops zippeliana 4 nbisL1-mrna-12871, nbisL1-mrna-12872, nbisL1-mrna-1338 ...
nbisL1-mrna-8908
Rhizophoraceae Kandelia candel 3 evm.TU.utg000008l.700, evm.TU.utg000010l.326 ...
evm.TU.utg000033l.466
Rhizophoraceae Kandelia obovata 3 Maker00000131, Maker00008771, Maker00015066
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-18292, nbisL1-mrna-2052, nbisL1-mrna-540
Rhizophoraceae Rhizophora mangle 3 nbisL1-mrna-8056, nbisL1-mrna-8944, nbisL1-mrna-9406
Salicaceae Populus euphratica 5 populus_peu04947, populus_peu04948, populus_peu29180 ...
populus_peu29181, populus_peu30537
Solanaceae Lycium barbarum 2 gene-LOC132631775, gene-LOC132635992
Solanaceae Solanum chilense 2 SOLCI004318000, SOLCI006698600
Solanaceae Solanum pennellii 2 gene-LOC107014834, gene-LOC107028570
Tamaricaceae Reaumuria soongarica 2 gene_13363, gene_5183
Tamaricaceae Tamarix chinensis 2 TC06G1946, TC11G1493
Zosteraceae Zostera marina 4 Zosma01g09160.v3.1, Zosma02g09020.v3.1, Zosma03g25670.v3.1 ...
Zosma06g03280.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.