Basic Information
Locus ID:
Cgl03G2171
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 26894651 | 26900797 | + | Cgl03G2171 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 39,820.87 Da | 50.37 | 66.24 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 164 | 7.4E-11 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 44 | 172 | 4.58E-23 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 186 | 3.5E-12 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 215 | 14.897257 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 240 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_018823688.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Juglans regia] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A834CQ66 | NAC domain-containing protein OS=Juglans regia OX=51240 GN=F2P56_011852 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology