Basic Information
Locus ID:
Cgl03G1835
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Cell division cycle 20.2, cofactor of APC complex-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 23042418 | 23046309 | + | Cgl03G1835 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 50,326.50 Da | 50.10 | 69.10 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 134 | 419 | 2.32269E-39 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 383 | 419 | 0.01 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 296 | 334 | 0.011 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 248 | 282 | 4.1E-6 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 165 | 223 | 4.5E-6 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 128 | 420 | 1.59E-55 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 77 | 422 | 3.2E-110 | IPR015943 |
| SMART | SM00320 | WD40_4 | 243 | 282 | 1.5E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 113 | 154 | 190.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 292 | 334 | 8.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 380 | 419 | 1.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 159 | 198 | 0.011 | IPR001680 |
| SMART | SM00320 | WD40_4 | 201 | 239 | 1.5 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 250 | 282 | 11.154684 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 387 | 420 | 9.651964 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 166 | 207 | 10.074014 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 250 | 282 | 13.449252 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 387 | 420 | 11.544415 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 406 | 420 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33260.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.2) | 0 |
| RefSeq | XP_028784837.1 | cell division cycle 20.2, cofactor of APC complex-like [Prosopis alba] | 0 |
| Q9S7I8 | Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A834SIF3 | Cell division cycle 20.1, cofactor of APC complex-like OS=Senna tora OX=362788 GN=G2W53_043307 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology