Basic Information
Locus ID:
Cgl03G1773
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Protein DA1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 22325120 | 22335899 | - | Cgl03G1773 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 57,849.81 Da | 52.73 | 69.92 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09396 | LIM_DA1 | 150 | 202 | 5.23531E-27 | - |
| CDD | cd08368 | LIM | 177 | 252 | 4.44604E-4 | - |
| Pfam | PF00412 | LIM domain | 150 | 204 | 1.4E-8 | IPR001781 |
| Pfam | PF12315 | Protein DA1 | 300 | 503 | 1.6E-94 | IPR022087 |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | 143 | 175 | 6.56E-7 | - |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | 176 | 234 | 1.22E-7 | - |
| Gene3D | G3DSA:2.10.110.10 | Cysteine Rich Protein | 145 | 223 | 3.6E-14 | - |
| SMART | SM00132 | lim_4 | 149 | 201 | 3.9E-11 | IPR001781 |
| SMART | SM00726 | uim | 108 | 127 | 0.094 | IPR003903 |
| SMART | SM00726 | uim | 77 | 96 | 0.059 | IPR003903 |
| ProSiteProfiles | PS50023 | LIM domain profile. | 148 | 208 | 11.7613 | IPR001781 |
| ProSiteProfiles | PS50330 | Ubiquitin-interacting motif (UIM) domain profile. | 108 | 127 | 10.066204 | IPR003903 |
| ProSiteProfiles | PS50330 | Ubiquitin-interacting motif (UIM) domain profile. | 77 | 96 | 9.793426 | IPR003903 |
| ProSitePatterns | PS00478 | LIM zinc-binding domain signature. | 150 | 184 | - | IPR001781 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19270.1 | DA1. | 0 |
| RefSeq | XP_035547197.1 | protein DA1-like isoform X2 [Juglans regia] | 0 |
| P0C7Q8 | Protein DA1 OS=Arabidopsis thaliana OX=3702 GN=DA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6RM66 | LIM zinc-binding domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_018450 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology