Basic Information
Locus ID:
Cgl03G1661
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 21256540 | 21263194 | + | Cgl03G1661 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 65,785.41 Da | 42.93 | 92.59 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14664 | STK_BAK1_like | 281 | 552 | 3.68463E-164 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 139 | 156 | 1.4 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 276 | 547 | 2.3E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 2 | 39 | 1.7E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 4 | 163 | 1.7E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 254 | 550 | 1.86E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 352 | 569 | 5.9E-71 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 244 | 351 | 8.4E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 185 | 3.3E-64 | IPR032675 |
| SMART | SM00220 | serkin_6 | 275 | 549 | 1.1E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 275 | 562 | 36.569618 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 139 | 160 | 7.018892 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 281 | 303 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 398 | 410 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71830.1 | somatic embryogenesis receptor-like kinase 1. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later | 0 |
| RefSeq | XP_018809494.1 | somatic embryogenesis receptor kinase 1 [Juglans regia] | 0 |
| Q94AG2 | Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=SERK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2I4DQR9 | somatic embryogenesis receptor kinase 1 OS=Juglans regia OX=51240 GN=LOC108982541 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology