Basic Information
Locus ID:
Cgl03G1510
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Cell division cycle
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 19591642 | 19593902 | - | Cgl03G1510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 38,011.57 Da | 46.92 | 85.33 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 25 | 317 | 1.444E-40 | - |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 53 | 107 | 2.6E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 175 | 214 | 1.5E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 280 | 316 | 0.0012 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 135 | 165 | 0.0076 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 24 | 318 | 1.71E-52 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 322 | 2.5E-99 | IPR015943 |
| SMART | SM00320 | WD40_4 | 278 | 317 | 1.0E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 43 | 83 | 1.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 127 | 166 | 2.9E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 172 | 214 | 5.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 86 | 123 | 1.4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 134 | 166 | 11.811761 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 285 | 318 | 10.390142 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 134 | 166 | 9.862871 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 285 | 318 | 12.480124 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 179 | 223 | 9.171722 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 59 | 92 | 8.837541 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 304 | 318 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 201 | 215 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27570.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_050254267.1 | cell division cycle 20.5, cofactor of APC complex-like [Quercus robur] | 0 |
| Q3E906 | Cell division cycle 20.5, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-5 PE=1 SV=3 | 0 | |
| TrEMBL | A0A5N6R7A3 | ANAPC4_WD40 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_013608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology