Basic Information
Locus ID:
Cgl03G1282
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 16363163 | 16363711 | + | Cgl03G1282 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.78 | 19,920.20 Da | 70.26 | 100.71 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 111 | 154 | 5.0E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 106 | 159 | 2.52E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 68 | 159 | 2.3E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 112 | 153 | 5.7E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 112 | 154 | 12.430266 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G18670.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_041021900.1 | RING-H2 finger protein ATL56-like [Juglans microcarpa x Juglans regia] | 0 |
| Q9ZV51 | RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6R8U1 | RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_013542 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology