Basic Information
Locus ID:
Cgl03G1114
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 13086178 | 13090897 | - | Cgl03G1114 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 43,767.66 Da | 38.82 | 71.78 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 72 | 366 | 3.5E-82 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 241 | 358 | 1.5E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 239 | 371 | 3.0E-41 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 244 | 359 | 22.909018 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 215 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.1 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_023885470.1 | auxin-responsive protein IAA9-like [Quercus suber] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A346RRL7 | Auxin-responsive protein OS=Betula platyphylla OX=78630 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology