Basic Information
Locus ID:
Cgl03G1061
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 12463755 | 12475356 | + | Cgl03G1061 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 66,347.18 Da | 27.95 | 72.92 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 28 | 158 | 4.11965E-47 | IPR033734 |
| CDD | cd09612 | Jacalin | 258 | 387 | 3.29541E-35 | IPR033734 |
| CDD | cd09612 | Jacalin | 459 | 588 | 1.55065E-42 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 456 | 588 | 1.8E-33 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 258 | 388 | 3.2E-26 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 30 | 159 | 9.4E-36 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 17 | 159 | 5.63E-45 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 445 | 587 | 2.22E-43 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 248 | 387 | 5.1E-38 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 4 | 157 | 1.3E-59 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 440 | 588 | 3.3E-53 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 236 | 388 | 1.9E-47 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 28 | 159 | 1.8E-45 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 258 | 389 | 5.3E-35 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 456 | 589 | 5.7E-48 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 445 | 589 | 52.76532 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 17 | 159 | 54.05027 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 247 | 389 | 45.018101 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.3 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_030950637.1 | jacalin-related lectin 3-like isoform X5 [Quercus lobata] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2N9IGY5 | Jacalin-related lectin 3-like OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51386 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology