Basic Information
Locus ID:
Cgl03G0305
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 3680839 | 3688572 | + | Cgl03G0305 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 91,110.67 Da | 44.29 | 89.22 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 538 | 671 | 2.6408E-24 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 540 | 670 | 4.3E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 694 | 736 | 4.3E-12 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 499 | 741 | 4.8E-60 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 672 | 741 | 1.0E-95 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 499 | 671 | 1.0E-95 | IPR027417 |
| SMART | SM00382 | AAA_5 | 536 | 673 | 1.5E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 643 | 662 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 756 | 771 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 477 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 737 | 773 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 199 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_018829264.1 | uncharacterized protein LOC108997437 isoform X2 [Juglans regia] | 0 |
| Q9P7J5 | Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC24B10.10c PE=3 SV=1 | 0 | |
| TrEMBL | A0A5N6R3A8 | AAA domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_012262 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology