Basic Information
Locus ID:
Cgl03G0248
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 2907061 | 2914830 | + | Cgl03G0248 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 121,971.43 Da | 47.18 | 74.72 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 955 | 987 | 0.0089 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 865 | 903 | 0.0039 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 782 | 1092 | 1.98E-46 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 498 | 597 | 1.48E-10 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 310 | 362 | 5.2E-5 | IPR011009 |
| Gene3D | G3DSA:2.130.10.10 | - | 755 | 1095 | 4.3E-121 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 312 | 592 | 7.0E-19 | - |
| SMART | SM00320 | WD40_4 | 863 | 903 | 3.3E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 949 | 987 | 3.9E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 766 | 810 | 3.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 998 | 1037 | 100.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1054 | 1093 | 130.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 906 | 945 | 2.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 821 | 860 | 0.16 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 956 | 989 | 12.947979 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 870 | 912 | 10.909469 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 197 | 586 | 9.842224 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 827 | 869 | 8.770704 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 956 | 989 | 10.759232 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 974 | 988 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 847 | 861 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 974 | 988 | 7.5E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 890 | 904 | 7.5E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 847 | 861 | 7.5E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| Coils | Coil | Coil | 619 | 646 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11110.1 | SPA1-related 2. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. | 0 |
| RefSeq | XP_040988121.1 | protein SPA1-RELATED 2-like [Juglans microcarpa x Juglans regia] | 0 |
| Q9T014 | Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6R8E1 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_012846 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology