Basic Information
Locus ID:
Cgl03G0132
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
14 kDa proline-rich protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 1626000 | 1631558 | + | Cgl03G0132 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 26,212.23 Da | 39.42 | 98.26 | 0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01958 | HPS_like | 54 | 136 | 1.02989E-27 | IPR027923 |
| CDD | cd01958 | HPS_like | 180 | 264 | 1.13538E-29 | IPR027923 |
| Pfam | PF14547 | Hydrophobic seed protein | 181 | 265 | 2.5E-26 | IPR027923 |
| Pfam | PF14547 | Hydrophobic seed protein | 55 | 137 | 9.8E-25 | IPR027923 |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 184 | 264 | 3.61E-24 | IPR036312 |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 58 | 137 | 4.68E-23 | IPR036312 |
| Gene3D | G3DSA:1.10.110.10 | - | 55 | 140 | 4.4E-27 | IPR036312 |
| Gene3D | G3DSA:1.10.110.10 | - | 181 | 265 | 1.4E-27 | IPR036312 |
| SMART | SM00499 | aai_6 | 56 | 140 | 2.6E-7 | IPR016140 |
| SMART | SM00499 | aai_6 | 182 | 264 | 1.4E-8 | IPR016140 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 51 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12510.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. | 0 |
| RefSeq | XP_025825385.1 | uncharacterized protein LOC112900803 [Panicum hallii] | 0 |
| P14009 | 14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3S3MPN4 | Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01643000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G0118 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl03G0120, Cgl03G0132 |