Basic Information
Locus ID:
Cgl03G0120
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
14 kDa proline-rich protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 1471317 | 1486698 | + | Cgl03G0120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 42,811.12 Da | 37.54 | 97.78 | 0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01958 | HPS_like | 351 | 435 | 7.87123E-28 | IPR027923 |
| CDD | cd01958 | HPS_like | 85 | 167 | 3.27654E-27 | IPR027923 |
| CDD | cd01958 | HPS_like | 219 | 291 | 8.20053E-22 | IPR027923 |
| Pfam | PF14547 | Hydrophobic seed protein | 220 | 296 | 5.1E-20 | IPR027923 |
| Pfam | PF14547 | Hydrophobic seed protein | 352 | 436 | 6.1E-26 | IPR027923 |
| Pfam | PF14547 | Hydrophobic seed protein | 86 | 168 | 1.3E-26 | IPR027923 |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 89 | 168 | 2.98E-24 | IPR036312 |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 355 | 435 | 8.72E-24 | IPR036312 |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 223 | 294 | 8.29E-19 | IPR036312 |
| Gene3D | G3DSA:1.10.110.10 | - | 86 | 171 | 2.5E-28 | IPR036312 |
| Gene3D | G3DSA:1.10.110.10 | - | 220 | 301 | 2.9E-22 | IPR036312 |
| Gene3D | G3DSA:1.10.110.10 | - | 352 | 436 | 3.4E-27 | IPR036312 |
| SMART | SM00499 | aai_6 | 353 | 435 | 1.4E-8 | IPR016140 |
| SMART | SM00499 | aai_6 | 87 | 167 | 1.1E-5 | IPR016140 |
| SMART | SM00499 | aai_6 | 221 | 321 | 1.7E-4 | IPR016140 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 26 | 5.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 64 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62510.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. | 0 |
| RefSeq | XP_025825385.1 | uncharacterized protein LOC112900803 [Panicum hallii] | 0 |
| Q39176 | Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0PCF7 | AAI domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G0118 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl03G0120, Cgl03G0132 |