HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Cgl02G2979
Species & Taxonomic ID: Casuarina glauca & 3522
Genome Assembly: GCA_028551395.1
Description: serine threonine-protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
chr02 33156154 33171455 - Cgl02G2979
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.01 92,238.72 Da 56.16 78.29 -0.47
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd13999 STKc_MAP3K-like 567 809 1.20391E-120 -
Pfam PF14381 Ethylene-responsive protein kinase Le-CTR1 58 251 1.2E-53 -
Pfam PF07714 Protein tyrosine and serine/threonine kinase 562 809 3.8E-61 IPR001245
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 536 809 1.26E-77 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 555 639 6.1E-31 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 640 815 1.6E-53 -
SMART SM00220 serkin_6 561 810 8.8E-60 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 561 816 39.947643 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 680 692 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 567 588 - IPR017441
MobiDBLite mobidb-lite consensus disorder prediction 443 467 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 22 - -
MobiDBLite mobidb-lite consensus disorder prediction 498 524 - -
MobiDBLite mobidb-lite consensus disorder prediction 361 414 - -
MobiDBLite mobidb-lite consensus disorder prediction 36 55 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04427 (mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) ko04013 (MAPK signaling pathway - fly) map04013 (MAPK signaling pathway - fly) map04064 (NF-kappa B signaling pathway) ko04140 (Autophagy - animal) map04140 (Autophagy - animal) ko04152 (AMPK signaling pathway) map04152 (AMPK signaling pathway) ko04214 (Apoptosis - fly) map04214 (Apoptosis - fly) ko04310 (Wnt signaling pathway) map04310 (Wnt signaling pathway) ko04520 (Adherens junction) map04520 (Adherens junction) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) map04622 (RIG-I-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway) map04657 (IL-17 signaling pathway) map04660 (T cell receptor signaling pathway) map04668 (TNF signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G58640.1 Mitogen activated protein kinase kinase kinase-related. 0
RefSeq XP_018852140.1 serine/threonine-protein kinase EDR1-like isoform X1 [Juglans regia] 0
Swiss-Prot Q9C9U5 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 0
TrEMBL A0A5N6KZS4 Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_024745 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 3 jg19301, jg22149, jg24373
Aizoaceae Mesembryanthemum crystallinum 1 gene_21184
Amaranthaceae Atriplex hortensis 1 Ah011763
Amaranthaceae Beta vulgaris 1 BVRB_9g209920
Amaranthaceae Salicornia bigelovii 2 Sbi_jg12035, Sbi_jg46956
Amaranthaceae Salicornia europaea 1 Seu_jg21249
Amaranthaceae Suaeda aralocaspica 1 GOSA_00009588
Amaranthaceae Suaeda glauca 2 Sgl80439, Sgl82900
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000016382, gene:ENSEOMG00000036752 ...
gene:ENSEOMG00000037001, gene:ENSEOMG00000038210, gene:ENSEOMG00000039459, gene:ENSEOMG00000052089
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.9AG0007810, CQ.Regalona.r1.9BG0012620
Anacardiaceae Pistacia vera 1 pistato.v30089290
Apiaceae Apium graveolens 3 Ag2G01673, Ag3G00521, Ag7G00823
Arecaceae Cocos nucifera 2 COCNU_03G013710, COCNU_06G005660
Arecaceae Phoenix dactylifera 2 gene-LOC103706893, gene-LOC103723063
Asparagaceae Asparagus officinalis 2 AsparagusV1_01.1388.V1.1, AsparagusV1_05.1849.V1.1
Asteraceae Flaveria trinervia 3 Ftri11G10675, Ftri15G29761, Ftri18G07681
Brassicaceae Arabidopsis thaliana 3 AT2G31010.1, AT2G42640.1, AT3G58640.1
Brassicaceae Eutrema salsugineum 3 Thhalv10005790m.g.v1.0, Thhalv10016276m.g.v1.0 ...
Thhalv10017734m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp4g13490.v2.2, Sp4g24770.v2.2, Sp5g04210.v2.2
Brassicaceae Brassica nigra 5 BniB01g003310.2N, BniB01g013160.2N, BniB06g054780.2N ...
BniB08g019290.2N, BniB08g073190.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq02G2862
Casuarinaceae Casuarina glauca 1 Cgl02G2979
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno06g04480
Dunaliellaceae Dunaliella salina 1 Dusal.0160s00006.v1.0
Hydrocharitaceae Thalassia testudinum 2 gene.Thate02g22980, gene.Thate02g35730
Malvaceae Hibiscus hamabo Siebold & Zucc. 4 nbisL1-mrna-10252, nbisL1-mrna-10253, nbisL1-mrna-4328 ...
nbisL1-mrna-6790
Nitrariaceae Nitraria sibirica 1 evm.TU.LG04.1706
Plantaginaceae Plantago ovata 2 Pov_00005586, Pov_00008580
Plumbaginaceae Limonium bicolor 3 Lb3G15964, Lb3G19495, Lb3G20027
Poaceae Echinochloa crus-galli 6 AH02.2716, AH07.998, BH02.2796, BH07.1111, CH02.3742 ...
CH07.887
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_1AG0028300, gene-QOZ80_1BG0078480 ...
gene-QOZ80_2AG0107530, gene-QOZ80_2BG0161150
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.3HG0279390.2, HORVU.MOREX.r3.6HG0584740.1
Poaceae Lolium multiflorum 2 gene-QYE76_021893, gene-QYE76_054531
Poaceae Oryza coarctata 4 Oco01G017040, Oco02G017260, Oco03G006540, Oco04G006800
Poaceae Oryza sativa 2 LOC_Os01g48330.1, LOC_Os02g14530.1
Poaceae Paspalum vaginatum 2 gene-BS78_03G228000, gene-BS78_04G100800
Poaceae Puccinellia tenuiflora 3 Pt_Chr0206423, Pt_Chr0602316, Pt_Chr0602327
Poaceae Sporobolus alterniflorus 7 Chr02G012950, Chr03G013320, Chr05G020740, Chr06G032050 ...
Chr08G013490, Chr0G013840, Chr15G023490
Poaceae Thinopyrum elongatum 2 Tel3E01G452800, Tel6E01G389200
Poaceae Triticum dicoccoides 4 gene_TRIDC3AG040340, gene_TRIDC3BG045480 ...
gene_TRIDC6AG028120, gene_TRIDC6BG034390
Poaceae Triticum aestivum 6 TraesCS3A02G271100.1, TraesCS3B02G304900.1 ...
TraesCS3D02G270900.1, TraesCS6A02G190500.2, TraesCS6B02G222400.1, TraesCS6D02G180500.1
Poaceae Zea mays 3 Zm00001eb157070_P004, Zm00001eb204640_P002 ...
Zm00001eb360130_P001
Poaceae Zoysia japonica 4 nbis-gene-26058, nbis-gene-34218, nbis-gene-51683 ...
nbis-gene-51684
Poaceae Zoysia macrostachya 3 Zma_g10855, Zma_g15409, Zma_g8415
Portulacaceae Portulaca oleracea 4 evm.TU.LG02.2150, evm.TU.LG07.1554, evm.TU.LG15.1705 ...
evm.TU.LG23.386
Posidoniaceae Posidonia oceanica 2 gene.Posoc03g17980, gene.Posoc08g02980
Rhizophoraceae Bruguiera sexangula 2 evm.TU.Scaffold_5_RagTag.1270, evm.TU.Scaffold_9_RagTag.1158
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-11742, nbisL1-mrna-21014
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-15207, nbisL1-mrna-8624
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-11184, nbisL1-mrna-18664
Rhizophoraceae Kandelia candel 2 evm.TU.utg000003l.719, evm.TU.utg000006l.743
Rhizophoraceae Kandelia obovata 2 Maker00009192, Maker00013035
Rhizophoraceae Rhizophora apiculata 2 nbisL1-mrna-1339, nbisL1-mrna-9803
Rhizophoraceae Rhizophora mangle 2 nbisL1-mrna-19962, nbisL1-mrna-4906
Salicaceae Populus euphratica 3 populus_peu19069, populus_peu27120, populus_peu37075
Solanaceae Lycium barbarum 3 gene-LOC132620451, gene-LOC132624899, gene-LOC132629982
Solanaceae Solanum chilense 3 SOLCI001206100, SOLCI003719700, SOLCI004129200
Solanaceae Solanum pennellii 3 gene-LOC107007393, gene-LOC107012033, gene-LOC107026049
Tamaricaceae Reaumuria soongarica 1 gene_14319
Tamaricaceae Tamarix chinensis 2 TC01G1957, TC03G1577
Zosteraceae Zostera marina 1 Zosma06g13090.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.