Basic Information
Locus ID:
Cgl02G2175
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Leucine-rich repeat receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 21695193 | 21699086 | + | Cgl02G2175 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 130,480.27 Da | 30.26 | 113.02 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 477 | 535 | 1.3E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 656 | 715 | 2.9E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 358 | 378 | 1.6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 166 | 185 | 0.77 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 239 | 260 | 1.2 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 65 | 8.7E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 381 | 439 | 8.5E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 632 | 652 | 0.45 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 925 | 1192 | 3.2E-46 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 312 | 1.53E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 588 | 813 | 4.42E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 902 | 1193 | 1.35E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 318 | 566 | 2.38E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 162 | 3.8E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 314 | 584 | 3.2E-78 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 997 | 1199 | 2.4E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 163 | 313 | 4.4E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 725 | 817 | 8.4E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 585 | 654 | 7.5E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 655 | 724 | 2.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 884 | 996 | 5.4E-39 | - |
| SMART | SM00365 | LRR_sd22_2 | 91 | 117 | 81.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 750 | 776 | 110.0 | - |
| SMART | SM00369 | LRR_typ_2 | 91 | 115 | 31.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 702 | 731 | 190.0 | - |
| SMART | SM00220 | serkin_6 | 921 | 1196 | 9.2E-33 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 522 | 548 | 120.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 139 | 169 | 250.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 630 | 645 | 110.0 | - |
| SMART | SM00369 | LRR_typ_2 | 702 | 725 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 164 | 188 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 630 | 653 | 9.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 236 | 260 | 64.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 678 | 701 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 284 | 308 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 163 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 750 | 774 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 355 | 379 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 498 | 522 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 546 | 569 | 330.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 632 | 654 | 7.280716 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 921 | 1199 | 38.831059 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 548 | 570 | 7.288416 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 927 | 950 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1043 | 1055 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 167 | 180 | 1.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 630 | 643 | 1.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07280.1 | Leucine-rich repeat transmembrane protein kinase. Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. | 0 |
| RefSeq | XP_042970798.1 | leucine-rich repeat receptor protein kinase EMS1-like [Carya illinoinensis] | 0 |
| Q9LYN8 | Leucine-rich repeat receptor protein kinase EMS1 OS=Arabidopsis thaliana OX=3702 GN=EMS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T1R1M7 | Protein kinase domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_03G104200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg12909, jg14016, jg2319, jg889 |
| Anacardiaceae | Pistacia vera | 8 | pistato.v30034580, pistato.v30167950, pistato.v30168050 ... |
| Apiaceae | Apium graveolens | 1 | Ag2G01986 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G03190 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G07280.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012465m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g35610.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g053610.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G2102 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G2175 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2700 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00010232 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC1BG058770 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12656, nbisL1-mrna-29200 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-10442, nbisL1-mrna-7229 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-12927, nbisL1-mrna-12928, nbisL1-mrna-2139 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000008l.31, add.evm.TU.utg000010l.151 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17149, nbisL1-mrna-17646 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-20612, nbisL1-mrna-6260 |
| Salicaceae | Populus euphratica | 2 | populus_peu29255, populus_peu30617 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631870 |
| Solanaceae | Solanum chilense | 1 | SOLCI001805500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014643 |