Basic Information
Locus ID:
Cgl02G1976
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
CRM domain-containing protein At3g25440
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 19114908 | 19130381 | + | Cgl02G1976 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 162,586.91 Da | 50.03 | 69.97 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 32 | 286 | 9.05728E-102 | - |
| Pfam | PF02365 | No apical meristem (NAM) protein | 406 | 547 | 5.8E-21 | IPR003441 |
| Pfam | PF01985 | CRS1 / YhbY (CRM) domain | 926 | 1009 | 2.6E-14 | IPR001890 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 29 | 286 | 2.5E-56 | IPR001245 |
| SUPERFAMILY | SSF75471 | YhbY-like | 925 | 1018 | 8.37E-19 | IPR035920 |
| SUPERFAMILY | SSF101941 | NAC domain | 390 | 566 | 8.5E-35 | IPR036093 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 314 | 3.24E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.110.60 | - | 925 | 1020 | 3.9E-15 | IPR035920 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 297 | 5.9E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 105 | 3.9E-21 | - |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 414 | 571 | 3.4E-28 | IPR036093 |
| SMART | SM00220 | serkin_6 | 26 | 290 | 4.3E-65 | IPR000719 |
| SMART | SM01103 | CRS1_YhbY_2 | 925 | 1009 | 1.8E-15 | IPR001890 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 405 | 566 | 29.715042 | IPR003441 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 26 | 290 | 42.73204 | IPR000719 |
| ProSiteProfiles | PS51295 | CRM domain profile. | 923 | 1020 | 17.700903 | IPR001890 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 32 | 53 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 610 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1089 | 1118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 852 | 871 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1305 | 1375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1160 | 1192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1200 | 1265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 871 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1390 | 1440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1089 | 1108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1160 | 1440 | - | - |
| Coils | Coil | Coil | 1033 | 1053 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_023915991.1 | adoMet-dependent rRNA methyltransferase SPB1 [Quercus suber] | 0 |
| Q9LT57 | CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1R3GMR3 | Protein kinase domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_24925 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology