Basic Information
Locus ID:
Cgl02G1176
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 10517557 | 10520409 | - | Cgl02G1176 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 51,522.32 Da | 45.40 | 71.56 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 191 | 450 | 7.12422E-41 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 285 | 320 | 4.1E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 330 | 365 | 0.0046 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 414 | 450 | 5.9E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 158 | 451 | 2.99E-59 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 119 | 452 | 4.5E-121 | IPR015943 |
| SMART | SM00320 | WD40_4 | 323 | 365 | 2.0E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 153 | 194 | 390.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 368 | 408 | 130.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 411 | 450 | 3.2E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 281 | 320 | 3.1E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 197 | 237 | 0.66 | IPR001680 |
| SMART | SM00320 | WD40_4 | 240 | 277 | 0.72 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 418 | 451 | 14.41838 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 288 | 320 | 10.943775 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 330 | 374 | 8.703868 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 418 | 451 | 11.919224 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 288 | 329 | 13.282162 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 437 | 451 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 57 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13840.1 | FIZZY-related 3. | 0 |
| RefSeq | XP_040993505.1 | protein FIZZY-RELATED 3 [Juglans microcarpa x Juglans regia] | 0 |
| A0A396ISC0 | B-type cell cycle switch protein ccs52B OS=Medicago truncatula OX=3880 GN=CCS52B PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QBS0 | Protein FIZZY-RELATED 3 OS=Carpinus fangiana OX=176857 GN=FH972_001455 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology