Basic Information
Locus ID:
Cgl02G1135
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 10099270 | 10101189 | + | Cgl02G1135 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 35,978.17 Da | 70.33 | 74.65 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 110 | 153 | 7.42947E-21 | - |
| Pfam | PF13639 | Ring finger domain | 110 | 153 | 1.4E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 91 | 158 | 2.36E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 78 | 158 | 7.1E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 111 | 152 | 1.0E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 111 | 153 | 12.076194 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 265 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53820.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_042967726.1 | RING-H2 finger protein ATL3-like [Carya illinoinensis] | 0 |
| P0C035 | RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QIH7 | RING-type E3 ubiquitin transferase OS=Carpinus fangiana OX=176857 GN=FH972_003456 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology