Basic Information
Locus ID:
Cgl02G1072
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Organic cation carnitine transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 9374330 | 9380621 | + | Cgl02G1072 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 57,058.64 Da | 37.14 | 114.25 | 0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07690 | Major Facilitator Superfamily | 342 | 482 | 8.7E-10 | IPR011701 |
| Pfam | PF00083 | Sugar (and other) transporter | 58 | 227 | 1.5E-31 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 10 | 482 | 9.68E-67 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 20 | 485 | 1.8E-82 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 26 | 477 | 39.259968 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 353 | 368 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_018838302.1 | organic cation/carnitine transporter 7 isoform X1 [Juglans regia] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QED4 | MFS domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_002164 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology