Basic Information
Locus ID:
Cgl02G0943
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 7969251 | 7970652 | - | Cgl02G0943 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 33,585.47 Da | 38.15 | 101.07 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 2 | 260 | 7.9E-26 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 277 | 8.67E-48 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 29 | 1.4E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 82 | 288 | 3.5E-51 | - |
| SMART | SM00220 | serkin_6 | 14 | 234 | 3.1E-4 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 92 | 278 | 2.7E-13 | - |
| PIRSF | PIRSF000654 | ILK | 1 | 53 | 4.4E-4 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 264 | 24.089296 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51800.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_023908292.1 | LRR receptor-like serine/threonine-protein kinase IOS1, partial [Quercus suber] | 0 |
| Q9C8I6 | LRR receptor-like serine/threonine-protein kinase IOS1 OS=Arabidopsis thaliana OX=3702 GN=IOS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9E6N1 | Protein kinase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2499 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4BG0008010, CQ.Regalona.r1.8AG0003310 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G0944 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl02G0935, Cgl02G0943, Cgl02G0952 |