Basic Information
Locus ID:
Cgl02G0935
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 7944336 | 7945823 | - | Cgl02G0935 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 36,017.11 Da | 40.54 | 94.95 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 62 | 289 | 4.9E-28 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 15 | 292 | 1.08E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 64 | 114 | 9.4E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 159 | 312 | 9.5E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 18 | 63 | 4.7E-7 | - |
| SMART | SM00220 | serkin_6 | 36 | 307 | 4.1E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 36 | 313 | 26.845425 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 198 | 210 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51890.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_042967969.1 | LRR receptor-like serine/threonine-protein kinase IOS1 isoform X1 [Carya illinoinensis] | 0 |
| Q9FZB1 | Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana OX=3702 GN=At1g51880 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A1W6R7 | Protein kinase domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR3G026350 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4BG0008010, CQ.Regalona.r1.8AG0003310 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G0944 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl02G0935, Cgl02G0943, Cgl02G0952 |